Institute of Biological and Chemical Systems - Biological Information Processing

Publications 2021

  1. HDL biodistribution and brain receptors in zebrafish, using HDLs as vectors for targeting endothelial cells and neural progenitors.
    Sulliman, N. C.; Ghaddar, B.; Gence, L.; Patche, J.; Rastegar, S.; Meilhac, O.; Diotel, N.
    2021. Scientific reports, 11 (1), Art. Nr.: 6439. doi:10.1038/s41598-021-85183-9Full textFull text of the publication as PDF document
  2. Transcription organizes euchromatin via microphase separation.
    Hilbert, L.; Sato, Y.; Kuznetsova, K.; Bianucci, T.; Kimura, H.; Jülicher, F.; Honigmann, A.; Zaburdaev, V.; Vastenhouw, N. L.
    2021. Nature Communications, 12 (1), Article no: 1360. doi:10.1038/s41467-021-21589-3Full textFull text of the publication as PDF document
  3. Regulation of ddb2 expression in blind cavefish and zebrafish reveals plasticity in the control of sunlight-induced DNA damage repair.
    Zhao, H.; Li, H.; Du, J.; Di Mauro, G.; Lungu-Mitea, S.; Geyer, N.; Vallone, D.; Bertolucci, C.; Foulkes, N. S.
    2021. PLoS Genetics, 17 (2), Art.-Nr. e1009356. doi:10.1371/JOURNAL.PGEN.1009356Full textFull text of the publication as PDF document
  4. Id1 and Id3 Are Regulated Through Matrix‐Assisted Autocrine BMP Signaling and Represent Therapeutic Targets in Melanoma.
    Sedlmeier, G.; Al‐Rawi, V.; Buchert, J.; Yserentant, K.; Rothley, M.; Steshina, A.; Gräßle, S.; Wu, R.; Hurrle, T.; Richer, W.; Decraene, C.; Thiele, W.; Utikal, J.; Abuillan, W.; Tanaka, M.; Herten, D.; Hill, C. S.; Garvalov, B. K.; Jung, N.; Bräse, S.; Sleeman, J. P.
    2021. Advanced therapeutics, 4 (2), Art.-Nr.: 2000065. doi:10.1002/adtp.202000065Full textFull text of the publication as PDF document
  5. Effects of incremental endosulfan sulfate exposure and high fat diet on lipid metabolism, glucose homeostasis and gut microbiota in mice.
    Yan, J.; Wang, D.; Meng, Z.; Yan, S.; Teng, M.; Jia, M.; Li, R.; Tian, S.; Weiss, C.; Zhou, Z.; Zhu, W.
    2021. Environmental pollution, 268 (A), Art.-Nr.: 115697. doi:10.1016/j.envpol.2020.115697
  6. The hierarchical packing of euchromatin domains can be described as multiplicative cascades.
    Noa, A.; Kuan, H.-S.; Aschmann, V.; Zaburdaev, V.; Hilbert, L.
    2021. PLoS Computational Biology. doi:10.1371/journal.pcbi.1008974Full textFull text of the publication as PDF document
  7. Functional characterization of circulating tumor cells (CTCs) from metastatic ER+/HER2− breast cancer reveals dependence on HER2 and FOXM1 for endocrine therapy resistance and tumor cell survival: Implications for treatment of ER+/HER2− breast cancer.
    Roßwag, S.; Cotarelo, C. L.; Pantel, K.; Riethdorf, S.; Sleeman, J. P.; Schmidt, M.; Thaler, S.
    2021. Cancers, 13 (8), Art.-Nr.: 1810. doi:10.3390/cancers13081810Full textFull text of the publication as PDF document
  8. Regulatory Function of Sympathetic Innervation on the Endo/Lysosomal Trafficking of Acetylcholine Receptor.
    Straka, T.; Schröder, C.; Roos, A.; Kollipara, L.; Sickmann, A.; Williams, M. P. I.; Hafner, M.; Khan, M. M.; Rudolf, R.
    2021. Frontiers in Physiology, 12, Art.-Nr.: 626707. doi:10.3389/fphys.2021.626707Full textFull text of the publication as PDF document
  9. Finding Nemo’s clock reveals switch from nocturnal to diurnal activity.
    Schalm, G.; Bruns, K.; Drachenberg, N.; Geyer, N.; Foulkes, N. S.; Bertolucci, C.; Gerlach, G.
    2021. Scientific Reports, 11 (1), Art.-Nr.: 6801. doi:10.1038/s41598-021-86244-9Full textFull text of the publication as PDF document
  10. Wavelet-based background and noise subtraction for fluorescence microscopy images.
    Hüpfel, M.; Kobitski, A. Y. U.; Zhang, W.; Nienhaus, G. U.
    2021. Biomedical Optics Express, 12 (2), 969–980. doi:10.1364/BOE.413181Full textFull text of the publication as PDF document
  11. Cellular Mechanisms Participating in Brain Repair of Adult Zebrafish and Mammals after Injury.
    Ghaddar, B.; Lübke, L.; Couret, D.; Rastegar, S.; Diotel, N.
    2021. Cells, 10 (2), 391. doi:10.3390/cells10020391Full textFull text of the publication as PDF document
  12. Super-resolution RNA imaging using a rhodamine-binding aptamer with fast exchange kinetics.
    Sunbul, M.; Lackner, J.; Martin, A.; Englert, D.; Hacene, B.; Grün, F.; Nienhaus, K.; Nienhaus, G. U.; Jäschke, A.
    2021. Nature Biotechnology, 5096. doi:10.1038/s41587-020-00794-3
  13. Boron-rich, cytocompatible block copolymer nanoparticles by polymerization-induced self-assembly.
    Huang, L. C. S.; Le, D.; Hsiao, I. L.; Fritsch-Decker, S.; Hald, C.; Huang, S.-C.; Chen, J.-K.; Hwu, J. R.; Weiss, C.; Hsu, M.-H.; Delaittre, G.
    2021. Polymer chemistry, 12 (1), 50–56. doi:10.1039/d0py00710bFull textFull text of the publication as PDF document
  14. Air–Liquid Interface Exposure of Lung Epithelial Cells to Low Doses of Nanoparticles to Assess Pulmonary Adverse Effects.
    Diabaté, S.; Armand, L.; Murugadoss, S.; Dilger, M.; Fritsch-Decker, S.; Schlager, C.; Béal, D.; Arnal, M.-E.; Biola-Clier, M.; Ambrose, S.; Mülhopt, S.; Paur, H.-R.; Lynch, I.; Valsami-Jones, E.; Carriere, M.; Weiss, C.
    2021. Nanomaterials, 11 (1), Art. Nr.: 65. doi:10.3390/nano11010065Full textFull text of the publication as PDF document