Lennart Hilbert - Publications

  1. Discovery of Hidden Dynamic Processes through AI-based Automated Active Learning: A Use Case in Light Microscopy
    Friederich, N.; Yamachui Sitcheu, A. J.; Neumann, O.; Mikut, R.; Hilbert, L.
    2024, March 12. AI and biology (2024), Heidelberg, Germany, March 12–15, 2024
  2. Stimulated emission double depletion nanoscopy with background correction at the single-pixel level
    Sedeh, A. B.; Kobitski, A.; Dai, S.; Eroğlu-Kayıkçı, S.; Nienhaus, K.; Hilbert, L.; Nienhaus, G. U.
    2023. Optics Letters, 48 (21), 5791–5794. doi:10.1364/OL.502001
  3. AI-based automated active learning for discovery of hidden dynamic processes: A use case in light microscopy
    Friederich, N.; Yamachui Sitcheu, A. J.; Neumann, O.; Eroglu-Kayıkçı, S.; Prizak, R.; Hilbert, L.; Mikut, R.
    2023. Proceedings-33. Workshop Computational Intelligence: Berlin, 23.-24. November 2023, 31–51, KIT Scientific Publishing. doi:10.48550/arXiv.2310.04461
  4. Amphiphiles Formed from Synthetic DNA-Nanomotifs Mimic the Stepwise Dispersal of Transcriptional Clusters in the Cell Nucleus
    Tschurikow, X.; Gadzekpo, A.; Tran, M. P.; Chatterjee, R.; Sobucki, M.; Zaburdaev, V.; Göpfrich, K.; Hilbert, L.
    2023. Nano Letters, 23 (17), 7815–7824. doi:10.1021/acs.nanolett.3c01301
  5. A DNA Segregation Module for Synthetic Cells
    Tran, M. P.; Chatterjee, R.; Dreher, Y.; Fichtler, J.; Jahnke, K.; Hilbert, L.; Zaburdaev, V.; Göpfrich, K.
    2023. Small, 19 (13), Art.-Nr.: 2202711. doi:10.1002/smll.202202711
  6. Noise facilitates entrainment of a population of uncoupled limit cycle oscillators
    Kumpost, V.; Hilbert, L.; Mikut, R.
    2023. Journal of The Royal Society Interface, 20 (198), Art.-Nr.: 20220781. doi:10.1098/rsif.2022.0781
  7. Deep-learning microscopy image reconstruction with quality control reveals second-scale rearrangements in RNA polymerase II clusters
    Hajiabadi, H.; Mamontova, I.; Prizak, R.; Pancholi, A.; Koziolek, A.; Hilbert, L.
    2022. (K. E. Nelson, Ed.) PNAS Nexus, 1 (3), 1–12. doi:10.1093/pnasnexus/pgac065
  8. RNA polymerase II clusters form in line with surface condensation on regulatory chromatin
    Hilbert, L.
  9. A stochastic oscillator model simulates the entrainment of vertebrate cellular clocks by light
    Kumpošt, V.; Vallone, D.; Gondi, S. B.; Foulkes, N. S.; Mikut, R.; Hilbert, L.
    2021. Scientific reports, 11 (1), Art.-Nr.: 14497. doi:10.1038/s41598-021-93913-2
  10. Transcription organizes euchromatin via microphase separation
    Hilbert, L.; Sato, Y.; Kuznetsova, K.; Bianucci, T.; Kimura, H.; Jülicher, F.; Honigmann, A.; Zaburdaev, V.; Vastenhouw, N. L.
    2021. Nature Communications, 12 (1), Article no: 1360. doi:10.1038/s41467-021-21589-3
  11. RNA polymerase II clusters form in line with surface condensation on regulatory chromatin
    Pancholi, A.; Klingberg, T.; Zhang, W.; Prizak, R.; Mamontova, I.; Noa, A.; Sobucki, M.; Kobitski, A. Y.; Nienhaus, G. U.; Zaburdaev, V.; Hilbert, L.
    2021. Molecular Systems Biology, 17 (9), Art.Nr. e10272. doi:10.15252/msb.202110272
  12. The hierarchical packing of euchromatin domains can be described as multiplicative cascades
    Noa, A.; Kuan, H.-S.; Aschmann, V.; Zaburdaev, V.; Hilbert, L.
    2021. PLoS Computational Biology, 17 (5), e1008974. doi:10.1371/journal.pcbi.1008974
  13. Histone H3K27 acetylation precedes active transcription during zebrafish zygotic genome activation as revealed by live-cell analysis
    Sato, Y.; Hilbert, L.; Oda, H.; Wan, Y.; Heddleston, J. M.; Chew, T.-L.; Zaburdaev, V.; Keller, P.; Lionnet, T.; Vastenhouw, N.; Kimura, H.
    2019. Development <Cambridge>, 146 (19), Article: dev179127. doi:10.1242/dev.179127
  14. Super-resolution imaging of densely packed DNA in nuclei of zebrafish embryos using stimulated emission double depletion microscopy
    Zhang, W.; Noa, A.; Nienhaus, K.; Hilbert, L.; Nienhaus, G. U.
    2019. Journal of physics / D, 52 (41), Art. Nr.: 414001. doi:10.1088/1361-6463/ab3200
  15. Spreading of perturbations in myosin group kinetics along actin filaments
    Balassy, Z.; Lauzon, A.-M.; Hilbert, L.
    2019. Proceedings of the National Academy of Sciences of the United States of America, 116 (35), 17336–17344. doi:10.1073/pnas.1904164116